Publications – Tadesse Lab

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SpectroGen: A physically informed generative artificial intelligence for accelerated cross-modality spectroscopic materials characterization
Yanmin Zhu
Loza F Tadesse
Matter

Journal Article

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Interplay of Electrostatic Interaction and Steric Repulsion between Bacteria and Gold Surface Influences Raman Enhancement
Jia Dong
Jeong Hee Kim
Isaac Pincus
Sujan Manna
Jennifer M Podgorski
Yanmin Zhu
Loza F Tadesse
Preprint

2025

Preprint

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Polymer-coated beads serving as Raman reporter for simultaneous target binding and identification
Loza F Tadesse
Marissa McDonald
Jongwan Lee
Nikiwe Mhlanga
Filed, Appl. No. : 63/501,380, International App: PCT/US2024/028577

2023

Patent

Patent

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Universal Spectral Transfer with Physical Prior-Informed Deep Generative Learning
Yanmin Zhu
Loza F Tadesse
Preprint

2024

Preprint

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From Genotype to Phenotype: Raman Spectroscopy and Machine Learning for Label-Free Single-Cell Analysis
Yirui Zhang
Kai Chang
Babatunde Ogunlade
Liam Herndon
Loza F Tadesse
Amanda R Kirane
Jennifer A Dionne
ACS Nano

2024

Journal Article

Link to published article

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Rapid, antibiotic incubation-free determination of tuberculosis drug resistance using machine learning and Raman spectroscopy
Babatunde Ogunlade
Loza F Tadesse
Hongquan Li
Nhat Vu
Niaz Banaei
Amy K Barczak
Amr AE Saleh
Manu Prakash
Jennifer A Dionne
Proceedings of the National Academy of Sciences 121

2024

Conference

PNAS 121

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MicrobioRaman: an open-access web repository for microbiological Raman spectroscopy data
Kang Soo Lee
Zachary Landry
Awais Athar
Uria Alcolombri
Pratchaya Pramoj Na Ayutthaya
David Berry
Philippe de Bettignies
Ji-Xin Cheng
Gabor Csucs
Li Cui
Volker Deckert
Thomas Dieing
Jennifer Dionne
Ondrej Doskocil
Glen D’Souza
Cristina García-Timermans
Notburga Gierlinger
Keisuke Goda
Roland Hatzenpichler
Richard J Henshaw
Wei E Huang
Ievgeniia Iermak
Natalia P Ivleva
Janina Kneipp
Patrick Kubryk
Kirsten Küsel
Tae Kwon Lee
Sung Sik Lee
Bo Ma
Clara Martínez-Pérez
Pavel Matousek
Rainer U Meckenstock
Wei Min
Peter Mojzeš
Oliver Müller
Naresh Kumar
Per Halkjær Nielsen
Ioan Notingher
Márton Palatinszky
Fátima C Pereira
Giuseppe Pezzotti
Zdenek Pilat
Filip Plesinger
Jürgen Popp
Alexander J Probst
Alessandra Riva
Amr AE Saleh
Ota Samek
Haley M Sapers
Olga T Schubert
Astrid KM Stubbusch
Loza F Tadesse
Gordon T Taylor
Michael Wagner
Jing Wang
Huabing Yin
Yang Yue
Renato Zenobi
Jacopo Zini
Ugis Sarkans
Roman Stocker
Nature Microbiology

2024

Journal Article

Nature Microbiology

Website

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Sharpness-Aware Minimization (SAM) Improves Classification Accuracy of Bacterial Raman Spectral Data Enabling Portable Diagnostics
Kaitlin Zareno
Jarett Dewbury
Siamak Sorooshyari
Hossein Mobahi
Loza F Tadesse
ICLR 5th Workshop on practical ML for limited/low resource settings

2024

Conference

PDF

Code
Label-free, real-time, whole-cell response monitoring with liquid Raman spectroscopy
Loza F Tadesse
Jack Hu
Amr AE Saleh
Stefanie S Jeffrey
Jennifer A Dionne
Filed, Appl. No.: PCT/US2021/048668.2021

2023

Patent

PDF
More than magnetic isolation: Dynabeads as strong Raman reporters toward simultaneous capture and identification of targets
Jongwan Lee
Marissa McDonald
Nikiwe Mhlanga
Jeon Woong Kang
Rohit Karnik
Loza F Tadesse
Journal of Raman Spectroscopy

2023

Journal Article

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