2024

Universal Spectral Transfer with Physical Prior-Informed Deep Generative Learning
Yanmin Zhu
Loza F Tadesse
Preprint

2024

Preprint

PDF
From Genotype to Phenotype: Raman Spectroscopy and Machine Learning for Label-Free Single-Cell Analysis
Yirui Zhang
Kai Chang
Babatunde Ogunlade
Liam Herndon
Loza F Tadesse
Amanda R Kirane
Jennifer A Dionne
ACS Nano

2024

Journal Article

Link to published article

PDF
Rapid, antibiotic incubation-free determination of tuberculosis drug resistance using machine learning and Raman spectroscopy
Babatunde Ogunlade
Loza F Tadesse
Hongquan Li
Nhat Vu
Niaz Banaei
Amy K Barczak
Amr AE Saleh
Manu Prakash
Jennifer A Dionne
Proceedings of the National Academy of Sciences 121

2024

Conference

PNAS 121

PDF
MicrobioRaman: an open-access web repository for microbiological Raman spectroscopy data
Kang Soo Lee
Zachary Landry
Awais Athar
Uria Alcolombri
Pratchaya Pramoj Na Ayutthaya
David Berry
Philippe de Bettignies
Ji-Xin Cheng
Gabor Csucs
Li Cui
Volker Deckert
Thomas Dieing
Jennifer Dionne
Ondrej Doskocil
Glen D’Souza
Cristina García-Timermans
Notburga Gierlinger
Keisuke Goda
Roland Hatzenpichler
Richard J Henshaw
Wei E Huang
Ievgeniia Iermak
Natalia P Ivleva
Janina Kneipp
Patrick Kubryk
Kirsten Küsel
Tae Kwon Lee
Sung Sik Lee
Bo Ma
Clara Martínez-Pérez
Pavel Matousek
Rainer U Meckenstock
Wei Min
Peter Mojzeš
Oliver Müller
Naresh Kumar
Per Halkjær Nielsen
Ioan Notingher
Márton Palatinszky
Fátima C Pereira
Giuseppe Pezzotti
Zdenek Pilat
Filip Plesinger
Jürgen Popp
Alexander J Probst
Alessandra Riva
Amr AE Saleh
Ota Samek
Haley M Sapers
Olga T Schubert
Astrid KM Stubbusch
Loza F Tadesse
Gordon T Taylor
Michael Wagner
Jing Wang
Huabing Yin
Yang Yue
Renato Zenobi
Jacopo Zini
Ugis Sarkans
Roman Stocker
Nature Microbiology

2024

Journal Article

Nature Microbiology

Website

PDF
Sharpness-Aware Minimization (SAM) Improves Classification Accuracy of Bacterial Raman Spectral Data Enabling Portable Diagnostics
Kaitlin Zareno
Jarett Dewbury
Siamak Sorooshyari
Hossein Mobahi
Loza F Tadesse
ICLR 5th Workshop on practical ML for limited/low resource settings

2024

Conference

PDF

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